Microbiology Resource Announcements
Nucleic acid secondary structures play important roles in regulating biological processes. StemLoop-Finder is a computational tool to recognize and annotate conserved structural motifs in large data sets. The program is optimized for the detection of stem-loop structures that may serve as origins of replication in circular replication-associated protein (Rep)-encoding single-stranded (CRESS) DNA viruses.
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Pratt, A. A., Torrance, E. L., Kasun, G. W., Stedman, K. M., & de la Higuera, I. (2021). StemLoop-Finder: a Tool for the Detection of DNA Hairpins with Conserved Motifs. Microbiology Resource Announcements, 10(26). https://doi.org/10.1128/mra.00424-21